mincheoly Goto Github PK

adaptive-filter-cgm

Research project by Christian Choe and Min Cheol Kim, supervised by Professor Bernard Widrow (Stanford EE).

bayesian-mutation-tree

Research project by Christian Choe and Min Cheol Kim for EE 372: Data Science for High Throughput Sequencing

cellular-feature-engineering

Exploration of quantitative techniques for extracting features from 3D confocal microscopy data of fibroblasts.

chainer-tutorial

For learning chainer

compressed_flow

confocal-image-analysis

Various image analysis scripts for confocal 3D microscopy.

cs182a-project

Using deep latent representations for improving linear hypothesis testing

digit-recognizer

Implementing simple neural networks for handwritten digit recognition

fmri-image-reconstruction

Reverse engineering the image that a person was seeing based on fMRI.

juana-summer-research

Analyzing HTEC scRNA-seq data for cell-type and cytokine specific responses

memento

memento-cxg

Generalized differential expression, including differential variability and coexpression

mincheoly.github.io

Personal website

mini-mincheol

Chatbot for chatting Min Cheol at different stages of his life

misc-seq

Collection of useful tools for sequencing outputs

perturbvi

Analyzing single-cell perturbation data with neural networks

pokemon-movie

Pokemon movie made in MATLAB (Final project for EE 168: Introduction to Digital Image Processing)

pooled-nonautonomous-screen

project-euler

Solutions to Project Euler problems. Don't read if you haven't solved them!

protein-dynamics-inference

Research project by Min Cheol Kim and Christian Choe, supervised by Dr. TJ Lane at Stanford Linear Accelerator Center (SLAC).

protein-linear-reconstruction

Final project for EE 368 (Digital Image Processing) by Christian Choe and Min Cheol Kim.

scvi

A deep generative model for gene expression profiles from single-cell RNA sequencing

scvi-extensions

Extensions for single cell Variational Inference method from Nir Yosef's lab

sicca_hackathon_2023

statsmodels

Statsmodels: statistical modeling and econometrics in Python

twitch-analytics

Some prediction and inference projects for MS&E 226: Small Data by Min Cheol Kim and Joseph Wu

utility

Utility functions for prototyping. Various io, display, and plotting tools