mingr-ma Goto Github PK

abide

ABIDE Preprocessed Initiative

acnet

Asymmetric CNN for image super-resolution (IEEE Transactions on Systmes, Man, and Cybernetics: Systems 2021)

brainprep

Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhancement and segmentation.

brainstorm

Implementation of "Data augmentation using learned transforms for one-shot medical image segmentation"

convnext

Code release for ConvNeXt model

docker-fsl

FSL docker container for Brainlife use

drmime

DRMIME - Differentiable Mutual Information and Matrix Exponential for Multi-Resolution Image Registration

examples

A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.

fast-symmetric-diffeomorphic-image-registration-with-convolutional-neural-networks

Fast Symmetric Diffeomorphic Image Registration with Convolutional Neural Networks

geodistk

geodesic distance transform of 2d/3d images

gradnorm

hue

Let’s Big Data. Hue is an open source Web interface for analyzing data with Hadoop.

icnet

Inverse-Consistent Deep Networks for Unsupervised Deformable Image Registration

image-reconstructor-patches

Reconstruct Image from Patches with a Variable Stride

improved-body-parts

Simple Pose: Rethinking and Improving a Bottom-up Approach for Multi-Person Pose Estimation

intensity-normalization

normalize the intensity of several MR image contrasts with various routines

miccai-lits2017

liver segmentation using deep learning

mri_intensity_normalization

Intensity normalization of multi-channel MRI images using the method proposed by Nyul et al. 2000

mydataset

normalized_gradient_field_pytorch

pytorch implementation of registration metric Normalized Gradient Field

py-hausdorff

Fast computation of Hausdorff distance in Python

pytorch-memory-utils

pytorch memory track code

pytorch-meta

A collection of extensions and data-loaders for few-shot learning & meta-learning in PyTorch

recursive-cascaded-networks

[ICCV 2019] Recursive Cascaded Networks for Unsupervised Medical Image Registration

regnet

Deformable Cross-modality MRI Registration Using 3D CNN

rfr-wwanet

rwcnet

Official implementation of Recurrence with Correlation Network for Medical Image Registration

s3

Skull stripping and brain tissue segmentation

sdhnet

[TMI 2023] Self-Distilled Hierarchical Network for Unsupervised Deformable Image Registration

sen-fcb

SEN-FCB: An Unsupervised Twinning Neural Network for Image Registration