Comments (4)
Hi @snehatuteja, please read the documentation at http://mimic.physionet.org/gettingstarted/overview/, and also the MIMIC-III paper at: http://www.nature.com/articles/sdata201635. These should give you an outline of the database structure.
Is there a way that I can map every ITEMID to figure out what vital signs or lab events it shows?
As noted in the documentation, the D_ITEMS table is a "Dictionary of ITEMIDs appearing in the MIMIC database, except those that relate to laboratory tests" and the D_LABITEMS table is a "Dictionary of ITEMIDs in the laboratory database that relate to laboratory tests". These should contain the information that you are looking for.
I tried mapping ITEMID in CHARTEVENT table using https://physionet.org/mimic2/UserGuide/UserGuide.pdf
The current version of MIMIC is MIMIC-III. The PDF you are looking at is an archived copy of the MIMIC-II documentation.
from mimic-website.
Hey,
Thank you so much for your reply!
Is there a way to map Subject_ID with the waveform data in the physio net
ATM?
Regards,
Sneha
Masters student
Computer Science Dept.
University of Illinois at Chicago
On Fri, Jul 22, 2016 at 4:47 PM, Tom Pollard [email protected]
wrote:
Hi @snehatuteja https://github.com/snehatuteja, please read the
documentation at http://mimic.physionet.org/gettingstarted/overview/, and
also the MIMIC-III paper at: http://www.nature.com/articles/sdata201635.
These should give you an outline of the database structure.Is there a way that I can map every ITEMID to figure out what vital signs
or lab events it shows?As noted in the documentation, the D_ITEMS table is a "Dictionary of
ITEMIDs appearing in the MIMIC database, except those that relate to
laboratory tests" and the D_LABITEMS table is a "Dictionary of ITEMIDs in
the laboratory database that relate to laboratory tests". These should
contain the information that you are looking for.I tried mapping ITEMID in CHARTEVENT table using
https://physionet.org/mimic2/UserGuide/UserGuide.pdfThe current version of MIMIC is MIMIC-III. The PDF you are looking at is
an archived copy of the MIMIC-II documentation.—
You are receiving this because you were mentioned.
Reply to this email directly, view it on GitHub
#49 (comment),
or mute the thread
https://github.com/notifications/unsubscribe-auth/AOiKtA88oAJj20KAB1K1njEyjuHsjI6dks5qYTqAgaJpZM4JTHA7
.
from mimic-website.
SUBJECT_ID maps to the waveforms directly.
See here for details on the matched waveforms: https://physionet.org/physiobank/database/mimic2wdb/matched/
See this issue for more details regarding the update for MIMIC-III: MIT-LCP/mimic-code#86
from mimic-website.
I want the neonates vital data along with Ins and Outs. The link you sent just have the adults data but not the neonates.
MIMIC contains data for both adults and neonates.
I have the MIMIC 2 data access but it does not have the full vitals in CHARTEVENTS file. The file that I have attached is of a Neonate patient and I have highlighted the vitals that I could map but the other ITEM_IDs could not be mapped to any other vitals. Can you please send me the link to Dictionary of ITEMIDs, so that I can map them?
D_ITEMS is the dictionary of ITEMIDs for both neonates and adults.
Also is there a way that I can map SUBJECT_IDs with the waveform data of neonates in Physio Bank ATM?
See here for details on the matched waveforms: https://physionet.org/physiobank/database/mimic2wdb/matched/
See this issue for more details regarding the update for MIMIC-III: MIT-LCP/mimic-code#86
from mimic-website.
Related Issues (20)
- MIMIC-IV services hadm_id same length with admission hadm_id HOT 1
- Adding "ingredientevents" and "omr" table to the website HOT 1
- When will the MIMIC IV Note module be available? HOT 1
- Remove "mimic_core" from BigQuery page HOT 1
- Update BigQuery setup instructions
- MIMIC-IV Change log
- MIMIC-III documentation
- What's new in MIMIC-IV?
- Link to instructions for credentialing process
- The labevents table
- Exemption from Informed Consent HOT 1
- Overview of the MIMIC-III data
- MIMIC-IV documentation: MIMIC-Note is currently not publicly available and the structure is subject to change.
- Getting Started
- hpcsevents
- MIMIC-IV-Core module link broken from main page
- Video Tutorial
- Missing Accessibility link HOT 1
- MIMIC-IV documentation
- Change log for 2.2
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from mimic-website.