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mleipzig's Projects

covid19-vaccine-alerter-pa icon covid19-vaccine-alerter-pa

A simple python script put into a cron job that will send an SMS text when a vaccine appointment is available. Runs on an AWS EC2 instance.

dicomsort icon dicomsort

A project to provide custom sorting and renaming of dicom files

dino icon dino

PyTorch code for Vision Transformers training with the Self-Supervised learning method DINO

hei-med icon hei-med

The Hamilton Eye Institute Macular Edema Dataset (HEI-MED) (formerly DMED) is a collection of 169 fundus images to train and test image processing algorithms for the detection of exudates and diabetic macular edema. The images have been collected as part of a telemedicine network for the diagnosis of diabetic retinopathy

poincaremaps icon poincaremaps

The need to understand cell developmental processes has spawned a plethora of computational methods for discovering hierarchies from scRNAseq data. However, existing techniques are based on Euclidean geometry which is not an optimal choice for modeling complex cell trajectories with multiple branches. To overcome this fundamental representation issue we propose Poincaré maps, a method harnessing the power of hyperbolic geometry into the realm of single-cell data analysis.

stanford_alpaca icon stanford_alpaca

Code and documentation to train Stanford's Alpaca models, and generate the data.

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