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Marcus' GitHub page

Who am I

I'm a Data Scientist with a strong background and interest in the life sciences. I currently work for MetaCell as a data scientist where I've worked on projects ranging from MRI processing all the way through to bioinformatics. Prior to that I was an Assistant Professor at Kyushu University.

In my spare time I also volunteer as an AI Engineer for FruitPunch AI where I work on a whole range of interesting projects. Including facial recognitions for Sea Turtles

Sea turtle facial recognition

Useful Links

LinkedIn | Twitter/X | Portfolio | Publications

Marcus Leiwe's Projects

afid icon afid

Analyses For Functional Imaging Data - Created by Andrew Lowe

datascienceportfolio icon datascienceportfolio

Check here for a showcase of the data science and data analysis projects that I've done

dcrawler icon dcrawler

dCrawler is a fully independent clustering algorithm that only requires a distance threshold (Th(d))

f1_predictqualifying icon f1_predictqualifying

Designed for the MLOps Zoomcamp. This repository contains code that we will use to predict the qualifying results based on the practice times

llm-zoomcamp icon llm-zoomcamp

LLM Zoomcamp - a free online course about building an AI bot that can answer questions about your knowledge base

mleiwe icon mleiwe

Config files for my GitHub profile.

modellingsupertetbow icon modellingsupertetbow

Codes used to model super-tetbow in n dimensions. Used to evaluate the percent discriminable and the percent unique

palmerspenguinsextended icon palmerspenguinsextended

ML Zoomcamp Capstone1 project, where I attempt to find the species of penguin, but make it a little harder

pathologyregistrationpipeline icon pathologyregistrationpipeline

A Project for the Merbl lab at Cornell. The aim is to create a registration pipeline whereby large .bif files of histological sections can be put in registration with an MRI template in order to view the anatomy in high resolution.

qdyefinder icon qdyefinder

QDye Finder is a pipeline that is used to cluster fragments based on their colour alone

tetbowcodes icon tetbowcodes

Codes and figure data used for "Bright multicolor labeling of neuronal circuits with fluorescent proteins and chemical tags" by Sakaguchi et al 2018

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