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3dunetcnn

Keras 3D U-Net Convolution Neural Network (CNN) designed for medical image segmentation

atlaskit

Tools for working with brain atlas labels

attentionbased-mis

Medical Image Segmentation Based on Attention mechanism(Fine-Tune for natural image[semantic/instance] segmentation)

brain-tumor-detection-in-3d-mris-using-dcgan

Using DCGAN for segmenting brain tumors from brain image scans

brain-tumor-segmentation-3d-unet-cnn

Brain tumor segmentation using a 3D UNet CNN

brats2018-tumor-segmentation

We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D UNet by adding additional brain parcellation with original MR images.

capsnetslaseg

Capsule Networks and Convolutional Neural Networks for the Automated Segmentation of Left Atrium in Cardiac MRI

data-science-bowl-2018

DATA-SCIENCE-BOWL-2018 Find the nuclei in divergent images to advance medical discovery

deep-learning-with-python-notebooks

Jupyter notebooks for the code samples of the book "Deep Learning with Python"

dockerized-pytest-course

LinkedIn Learning course covering Python Unit Test with Pytest, Docker, and TDD principles

elastic-boundary-projection

Implementation of EBP - CVPR 2019

hyperdensenet

This repository contains the code of HyperDenseNet, a hyper-densely connected CNN to segment medical images in multi-modal image scenarios.

hyperdensenet_pytorch

Pytorch version of the HyperDenseNet deep neural network for multi-modal image segmentation

kits19.miscnn

Kidney Tumor Segmentation Challenge 2019: MIScnn - 3D Residual U-Net

lab-workshops

Materials for workshops on text mining, machine learning, and data visualization

medicalzoopytorch

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

miscnn

A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning

nnunet

organsegrstn_pytorch

PyTorch implementation of OrganSegRSTN - CVPR 2018

platipy

Processing Library and Analysis Toolkit for Medical Imaging in Python

python-novice-gapminder

Introduction to Python for non-programmers using gapminder data

test_1223

unet-lits-2d-pipeline

Liver Lesion Segmentation with 2D Unets

unsuprevised_seg_via_cnn