mohsenzakeri Goto Github PK
Name: Mohsen Zakeri
Type: User
Bio: Computational Biology, postdoc at Langmead Lab, Graduated from Combine Lab at UMD and SBU, Software Engineering at University of Tehran
Twitter: mohsenzakeri1
Blog: mohsenzakeri.com
Mohsen Zakeri's Projects
aagpwsmm
alevin-fry
🐟 🔬🦀 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.
bbhash
clean-fasta
dissertation
fm-index
leran-rust
Let's try learning a new language
mohsenzakeri.github.io
Mohsen Zakeri's homepage
movi
Fast and cache-efficient full-text pangenome index
movi-experiments
This repository includes the workflow for the main experiments in the Movi paper.
my-cv
This will include my updated CV.
my-scripts
The scripts I use regularly.
pufferfish
An efficient index for the colored, compacted, de Bruijn graph
quantification-models
rpe
Preparing report for "Research Proficiency Examination"
sailfish-vbng
salmon
Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments
se-lab-group3
sleep-planer
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