Comments (2)
Hi Joshua,
The Convert function is part of Seurat, not part of loomR.
loom support in Seurat is still a work in progress, but you can check it out by looking at the loom branch of Seurat. If you'd like to install it, you can use
devtools::install_github(repo = 'satijalab/Seurat', ref = 'loom')
from loomr.
Aha! Thanks for the clarification. The base problem we're trying to solve is how to get our Seurat object over to python, and passing through loom seemed like the most direct way.
from loomr.
Related Issues (20)
- Loom file outdated version for loompy HOT 2
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