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Name: Monkol Lek
Type: User
Company: Yale University
Bio: Assistant Professor, Yale Genetics
Twitter: theFourier2k
Location: New Haven, CT
Blog: http://leklab.org
Name: Monkol Lek
Type: User
Company: Yale University
Bio: Assistant Professor, Yale Genetics
Twitter: theFourier2k
Location: New Haven, CT
Blog: http://leklab.org
An implementation of the DeepMind's AlphaFold based on PyTorch for research
An automatic Hearthstone tracker for Android
Tools created from htslib/samtools libraries
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
SV detection from paired end reads mapping
Code for various tutorials and programs I've written about on my blog
Tools to produce handy genome visualizations in SVG format
A deck tracker and deck manager for Hearthstone on macOS
A Java API for high-throughput sequencing data (HTS) formats.
C library for high-throughput sequencing data formats
lumpy: a general probabilistic framework for structural variant discovery
JavaScript tools for exploring variant data
fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads.
a toolkit for working with Oxford nanopore data
ProSPr: Protein Structure Prediction
repository for analysis of recessive genes
samblaster: a tool to mark duplicates and extract discordant and split reads from sam files.
Tools (written in C using htslib) for manipulating next-generation sequencing data
Split-read aligner
web-based analysis tool for rare disease genomics
Note: tabix and bgzip binaries are now part of the HTSlib project.
Scripts for analyzing VCF files
verifyBAMID with CRAM support
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.