Comments (1)
The TALON code has been converted over to using exon objects rather than exon coordinates.
from talon.
Related Issues (20)
- many novel isoforms of very short, even 1bp HOT 2
- missing temporary bam files HOT 2
- How to run downstream differential analysis with an expanded transcriptome generated by TALON. HOT 4
- Key Error: "gene novelty" HOT 1
- Annotation name not found HOT 11
- Error when using non-human GTF HOT 2
- What database to use? HOT 2
- TALON on single-cell data HOT 10
- Multithread bam sort HOT 2
- Error message : ValueError: SAM transcript 463c55e7-91c0-45cf-9630-122afc9a2267 lacks an MD tag HOT 1
- I get 'Annotation name 'ADV5_annot' not found in this database' in step talon_abundance HOT 1
- numpy<1.24.0 should be added as a requirement
- Error: value too large to convert to int16_t HOT 1
- Single cell reads appear to be unlabelled when filtering transcripts HOT 1
- How to visualize custom gtf? HOT 1
- operand type error in talon_initialize_database HOT 1
- Duplicate transcripts - forward and reverse. HOT 3
- talon_filter_transcript --minCounts with --maxFracA HOT 1
- Rules for considering splicing variants as identical in TALON HOT 2
- fail to extract CB field HOT 2
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