mortele Goto Github PK

adaptive-resolution-md-hpf

Framework for simulating hybrid particle-field (hPF) dynamics with a part of the simulation box using all-atom molecular dynamics (MD).

atomify-lammps

Atomify - a live LAMMPS visualizer

classical-qm-oscillator

Short script for computing and plotting the probability density function for classical and quantum harmonic oscillation.

computationalphysics2

diffusion

Simple finite difference diffusion equation solver written in C++.

econagentmodel

Simple agent-interaction Monte Carlo simulation of wealth distribution in an economy. Inspired by https://www.sciencedirect.com/science/article/pii/S0378437104004327.

evince

fastexp

Implementation of a fast(-ish) approximate exponential function for negative powers, based on polynomial approximations of different orders. Inspired by https://www.researchgate.net/publication/272178514_Fast_Exponential_Computation_on_SIMD_Architectures.

fruit

Fortran unit test framework FRUIT. Mirror of sourceforge project, v3.4.3

fruitpy

Python interface for the FRUIT Fortran unit testing framework

funwithtensorflow

fys-kjm4480

Reports from mandatory projects from the course FYS-KJM4480: Quantum mechanics for many-particle systems

fys-stk4155

Project work for the course FYS-STK4155: Applied data analysis and machine learning at the University of Oslo

fys3150

Solutions to intro assignments in FYS3150: Computational Physics at UiO.

fys4411

VMC framework for atoms and molecules

hartreefock

A complete Hartree-Fock framework employing Gaussian basis functions written from scratch in C++.

hpf-membrane-profiles

Lipid bilayer profiles measured with MD and hPF from [de Nicola et. al, J. Chem. Theory Comput.2011, 7, 9, 2947-2962]

hymd

Massively parallel hybrid particle-field molecular dynamics in Python.

insane

INSert membrANE - A simple, versatile tool for building coarse-grained simulation systems

lammps

Public development project of the LAMMPS MD software package

machinelearning

For better online viewing of the material

macos-virtualbox

Push-button installer of macOS Catalina, Mojave, and High Sierra guests in Virtualbox for Windows, Linux, and macOS

makedepf90

Generate make dependencies for Fortran code

master

LaTeX source code for my master thesis.

master-presentation

My master thesis defence presentation, written in doconce-assisted reveal.js.

master-thesis

Master thesis

matlab-animation

Simple example of n-body animations using the matlab plotter.

md

Simple molecular dynamics integrator written from scratch in C++.

molecular-dynamics-fys3150

mp-sort

Massively Parallel Histogram Sort