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alphafold

Open source code for AlphaFold.

anarci

Antibody Numbering and Antigen Receptor ClassIfication

bigdata

Running Big Data applications within SLURM on the ACCRE traditional HPC cluster.

bio_embeddings

Get protein embeddings from protein sequences

biobase

Biobase: Base functions for Bioconductor

biopython

Official git repository for Biopython (converted from CVS)

cancerhaplotypeinheritance

Using machine learning to align individual genome and population variant graphs

deepmind-research

This repository contains implementations and illustrative code to accompany DeepMind publications

dev-nov-02

Nov 02 GH for Devs

github-games

A fun way to learn about Git and GitHub

intro-to-rnaseq-hpc-gt

Introduction to RNA-seq using HPC

multigsea.shiny

Provides shiny components to visualize multilGSEA results

ngi-rnaseq

Nextflow RNA-Seq Best Practice analysis pipeline, used at the SciLifeLab National Genomics Infrastructure.

parse-pdb

A small utility for parsing PDB files into useable JSON

pdb-tools

A dependency-free cross-platform swiss army knife for PDB files.

protwis

Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G protein-coupled receptors (GPCRs).

r-ecology-lesson

:notebook: Data Carpentry R lessons on ecology.

sciencegurus

scripts

An eclectic collection of helper scripts created for Jalview. Might be of use to others.

septic_shock_degs

Septic Shock Differential Expression Genes Analysis

shiny-training-2017-05-genentech

Slides and demo materials for the 2-day Intermediate Shiny Workshop at Genentech, May 2017

smith-waterman-algorithm

Python implementation of Smith Waterman Algorithm