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Richard Murray's Projects

bi-be-cs-183-2023 icon bi-be-cs-183-2023

Introduction to Computational Biology and Bioinformatics Course at Caltech, 2023

biocrnpyler icon biocrnpyler

A modular compiler for biological chemical reaction networks

bioscrape icon bioscrape

bioscrape (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)

ccl icon ccl

This library has functions for parsing ccl (the language used by gro) into a set of C++ objects.

gr1c icon gr1c

a collection of tools for GR(1) synthesis and related activities

gro icon gro

The gro bacterial micro-colony growth specification and simulation software. For more information see the gro website, listed below.

harold icon harold

An MIT licensed systems and controls toolbox for Python.

mls icon mls

Source code for MLS software

ntg icon ntg

Nonlinear trajectory generation library

subsbml icon subsbml

Python package for managing systems and subsystems of SBML models

txtlsim icon txtlsim

Cell-free expression modeling toolbox for MATLAB

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