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robinschmid avatar robinschmid commented on August 19, 2024

Try using MZmine 3 and the SIRIUS export it contains MS1 and MS2
If you are a developer also consider joining the project and you will get access to way more information that captured by just MGF.

I guess you are talking about the GNPS mgf and that's the requirements from GNPS. feature table and mgf with only MS2

from mzmine3.

peijiying avatar peijiying commented on August 19, 2024

from mzmine3.

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