Finetuing about protein_bert HOT 7 CLOSED

You can see for example how we do that in FinetuningModelGenerator.

from protein_bert.

hi，And if it’s feature extraction, what am I supposed to do?

from protein_bert.

I don't understand your question. Could you clarify?

from protein_bert.

I don't understand your question. Could you clarify?
I want to put the fine-tuned get_model_with_hidden_layers_as_outputs output out separately, I don't know what to do

from protein_bert.

Sorry, I don't understand your question. To help you, I will need more context/details and a clearer description of what you are trying to do.

from protein_bert.

Thank you so much for helping me .
I want to do a sequence analysis.And I want to take the input vector for the Softmax layer ，which is the output of Local and Global respresentations.and use it as my feature extraction to feed it into my own framework.

from protein_bert.

You can see how to extract ProteinBERT's representations here.

from protein_bert.