Comments (4)
zhangweizhenGitHub
commented on July 24, 2024
i can access it ,thanks
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liuqianhn
commented on July 24, 2024
Hi, I have an issue to download the pkl. May I know why?
My command and the output is below
wget ftp://ftp.cs.huji.ac.il/users/nadavb/protein_bert/epoch_92400_sample_23500000.pkl
--2022-05-20 14:18:16-- ftp://ftp.cs.huji.ac.il/users/nadavb/protein_bert/epoch_92400_sample_23500000.pkl
=> ‘epoch_92400_sample_23500000.pkl’
Resolving ftp.cs.huji.ac.il (ftp.cs.huji.ac.il)... 132.65.116.15
Connecting to ftp.cs.huji.ac.il (ftp.cs.huji.ac.il)|132.65.116.15|:21... connected.
Logging in as anonymous ... Logged in!
==> SYST ... done. ==> PWD ... done.
==> TYPE I ... done. ==> CWD (1) /users/nadavb/protein_bert ...
No such directory ‘users/nadavb/protein_bert’.
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nadavbra
commented on July 24, 2024
@liuqianhn Maybe try downloading it from a different machine? I know that some servers (e.g. AWS) block it for some reason...
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liuqianhn
commented on July 24, 2024
@nadavbra Thanks for your reply. It seems that the downloading works on the other machine.
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Related Issues (20)
- Failing to get the weights from the dedicated github repo HOT 5
- Use ProteinBERT with Own Dataset HOT 3
- Original h5 file HOT 5
- loss plot during pretraining HOT 1
- signal peptide detection HOT 1
- KeyError: "Unable to open object (object 'test_set_mask' doesn't exist)" HOT 6
- How to extract the embedding of an amino acid? HOT 10
- Graph execution error HOT 6
- Extract local and global representation using finetune model HOT 1
- Running Benchmarks HOT 4
- Evaluation on larger data set HOT 6
- Using vector representations in the "weights" parameter in the "embedding" section of an LSTM model after fine-tuning my own data HOT 1
- Failing to extract global embedding (1,15599) -> (1,512) HOT 1
- What do the settings mean? HOT 3
- Error when trying to run the finetuning code given in the jupyter notebook HOT 2
- ValueError, set_weights error
- model_generation.py list is not callable error HOT 2
- GO annotations during fine tuning HOT 1
- Missing MajorPTMs train CSV file HOT 1
- Can't get proteinBERT to run on GPU HOT 1
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