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16s-r--docker-and-nextflow

H3ABioNet 16S rDNA diverstity analysis package

16s-rrna-end-to-end-analysis

Qiime2 and DADA2 are one of the latest bioinformatics tools used in 16S RNA analysis. The current Qiime2 and DADA2 pipelines support End to End 16S RNA analysis, among other analyses.

16srrna-r-studio-after-qiime2

The analysis of 16S rRNA amplicon sequences from the ileum (N = 227) and cecum (N = 239) of broiler chickens differentiated by genetic line and exposure to Salmonella Typhimurium.

ai-merge

Import your SVG, AI, EPS, and PDF files into a single Illustrator document.

alphafold

Open source code for AlphaFold.

ampliseq

16S rRNA amplicon sequencing analysis workflow using QIIME2

ancientmetagenomedir

Repository containing lists of all published ancient metagenome samples (and related)

asap

A scalable bacterial genome assembly, annotation and analysis pipeline

bacterial-genomics-tutorial

bakta

Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

dada2

Accurate sample inference from amplicon data with single nucleotide resolution

dnachisel

:pencil2: A versatile DNA sequence optimizer

dnafeaturesviewer

:eye: Python library to plot DNA sequence features (e.g. from Genbank files)

et-gwas

ezmap

fastatoagpconversion

Fasta format to AGP conversion for Genome Submission

geneblocks

:diamond_shape_with_a_dot_inside: Find common blocks and differences between DNA sequences

ggpubr

'ggplot2' Based Publication Ready Plots

glass-website

gutmicrobiota

js4ai

Collection of Javascripts for Adobe Illustrator

keggmap

ggplot2 to plot kegg pathway based on xml file

microbiome

scripts for microbiome analysis

microbiome_analysis_in-_r_powerful

microbiomebestpracticereview

Current Challenges and Best Practice Protocols for Microbiome Analysis using Amplicon and Metagenomic Sequencing

microbiomeprotocol

Microbiome Protocol eBook related documents and scripts.

microbiotaprocess

microeco

:exclamation: This is a read-only mirror of the CRAN R package repository. microeco — Microbial Community Ecology Data Analysis. Homepage: https://github.com/ChiLiubio/microeco

mothur_galaxy

This folder ultimately should contains all my project shown in my Youtube channel.

mothur_otu_16srrna_analysis