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ara-scaffold

bioit

Repository for work performed during the 2022 BioIT Hackathon

biothings.api

BioThings API framework - Making high-performance API for biological annotation data

biothings_explorer

BioThings Explorer: a schema-based client for API interoperability

clinical-data-committee-tracking-voting

cohd_api

connections-hypothesis-provider-roadmap

Contains milestones, both internal to CHP and external to NCATS, as well as development deliverables.

connections_hypothesis_provider

The NCATS Connections Hypothesis Provider (CHP).

connections_hypothesis_provider_api

The NCATS Connections Hypothesis Provider (CHP) API

connections_hypothesis_provider_client

Lightweight Python client for the NCATS Connections Hypothesis Provider (CHP)

epcc-biolink-model-additions

Schema and generated objects for biolink data model and upper ontology

evidence-provenance-confidence-working-group

explanatory-agent

feedback

A repo for tracking gaps in Translator data and finding ways to fill them.

knowledge_graph_exchange_registry

The Biomedical Data Translator Consortium site for development of Knowledge Graph Exchange Standards and Registry

knowledgeproviderscaffold

Example Responses and Documentation for Knowledge Providers

kp_info_wg

linkbrokers

Tracking issues of Link Brokers Team (incl Autonomous Relay) for NCATS Biomedical Data Translator

loadtesting

medikanren

Proof-of-concept for reasoning over the SemMedDB knowledge base, using miniKanren + heuristics + indexing.

minihackathons

operationsandworkflows

A repo for the nascent "operations and workflow" language

opposites

This repo serves as a central point of coordination of Translator and external efforts to compile conceptual and relational opposites

pipeline---benchmarking-grouping

reasoner-validator

Validation of Translator OpenAPI (TRAPI) messages both to TRAPI and Biolink Model standards. See https://ncatstranslator.github.io/reasoner-validator/

reasonerapi

NCATS Biomedical Translator Reasoners Standard API

relay

Autonomous relay system for NCATS Biomedical Data Translator

smartapi

Intelligent APIs for a more connected web: http://smart-api.info

srigovernance

Coordinating governance for the Translator community

tact

For voting on two-month release cycle items