Comments (2)
There was a bug in the system which allowed the high scoring gene to get
deleted in the duplicate gene removal process. This caused an orphaned gene ID
that would return 'None' when requested. The 'HALTED' output referenced in the
bug report indicates that the issue was detected by gts.
The halted state will remain as a preventative measure. There's no use using a
GA system that deletes the highest scoring genes ;)
The root case for the gene deletion has already been addressed on the
experimental branch and is currently being tested. When the experimental branch
is merged into the main branch, I'll release a download version with the fix.
Original comment by [email protected]
on 17 Dec 2011 at 12:07
- Changed state: Started
from ga-bitbot.
gts.py now exits on this condition. The preferred method of running the system
is with gal.py (system/process launcher/monitor) which will enable automatic
relaunch of halted processes.
This fault condition should only happen very rarely if at all anymore.
Original comment by [email protected]
on 2 Jan 2012 at 7:44
- Changed state: Verified
from ga-bitbot.
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