neurospin Goto Github PK
Name: NeuroSpin
Type: Organization
Bio: Neuroimaging research centre
Location: France
Blog: http://joliot.cea.fr/drf/joliot/Pages/Entites_de_recherche/NeuroSpin.aspx
Name: NeuroSpin
Type: Organization
Bio: Neuroimaging research centre
Location: France
Blog: http://joliot.cea.fr/drf/joliot/Pages/Entites_de_recherche/NeuroSpin.aspx
Package to generate/request a filesystem reference.
Predict age from brain anatomy measures of Grey Matter (GM) volumes.
Brainomics project deliverables
Business logic for population imaging
Pytorch implementation of a G-CNN with a U-Net architecture, using discrete 3D roto-translational equivariant convolutions, to segment the hippocampal subfields on 3D MRIs.
Clinical dMRI
Multi modal utilities
Parcellation of the mid-sagittal section of the corpus callosum based on bilateral homotopic connectivity
interactive 3D plots in juptrer notebooks
a pythonic toolbox for Brainvisa entities
Python scripts for multifractal analysis of source-reconstructed MEG time series (Dynacomp protocol)
Material for fMRI training that takes place at Neurospin
The Gadgetron is an open source framework for medical image reconstruction.
The GAIA website
https://genibabel.readthedocs.io/en/latest
Code for Gondova et al., 2022 (Neuroimage: Reports)
Analysis tools for sub-millimetre MRI of the cerebral cortex
Hippocampal Segmentation Factory (HSF). A one-liner Deep Learning tool to segment raw T2w (and T1w) MRIs into hippocampal subfields in few seconds. Trained on 700+ manually segmented hippocampi.
Training code for the Hippocampal Segmentation Factory
scripts to import MRI scans from neurospin's acquisition database
Brainomics/Localizer
LimeSurvey RemoteControl 2 API client library
On the relationship between 1/f and periodic brain dynamics (alpha-band oscillations)
Code dedicated to the analysis of MTT M/EEG experiment
netSGCCA in Python
Code for Neumane et al., 2022 (Frontiers in Human Neuroscience)
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