Comments (2)
You could accomplish this in the script:
script:
"""
cp .command.sh ${id}.${task.process}.txt
"""
You shouldn't rename helper files because it can break the Nextflow runtime. Copying them is fine, but still a bit sketchy since these files are internal, they aren't like a public user-facing API
from nextflow.
my goal is to avoid doing it in the script
section
from nextflow.
Related Issues (20)
- The user-provided path .command.log does not exist.
- Undocumented behavior - Duplicated workflow parameters when using specific naming conventions HOT 1
- Commit tag `[ci fast]` is not working anymore
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- Improve stability of virtual threads at scale
- Issue Debuging pulling from a Private repo
- Default resources documentation HOT 3
- Inspect command improvement for Singularity HOT 16
- Upgrade libraries on 23.10.1 HOT 6
- Taskbar API is not supported on the current platform error when running console command HOT 8
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- Extend latest version of nf-ga4gh plugin - most recently published appears to be from Dec. 19 2020 HOT 11
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- Postfixing `+` in `nextflow.version.matches()` is not working properly HOT 7
- Failed to publish files to S3 due to `java.nio.file.DirectoryNotEmptyException`
- Request to enable dynamic `cache` directive HOT 4
- the Nextflow DAG should render as a subway plot HOT 1
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