Comments (2)
Thank you for your feedback, and I will fix it in the next release. But now, you can change line 187 in file nextpolish1.py to pbases = [(pdata[p].pos, pdata[p].index, byte2str(pdata[p].curbase), byte2str(pdata[p].base)) for p in range(c_seq.contents.datalength)]
or use python2.
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Hi, I have updated a new version to fix this bug, pls update to the lastest version to avoid this bug.
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Related Issues (20)
- Reduction in genome size after polishing HOT 3
- how to deal with "N" HOT 1
- Polish with raw or corrected ONT reads? HOT 1
- NextPolish slurmstepd: error: JOB CANCELLED DUE TO TIME LIMIT HOT 6
- Using Illumina Hi-C and Chicago data? HOT 4
- How to use Nextpolish on NextDenovo draft assembly HOT 2
- Need information related to example given in NextPolish Software under the folder test_data HOT 4
- MissAssembly Correction using NextPolish (Need Suggestions) HOT 1
- nextpolish2.py never stop HOT 6
- Adding Hisat2 instead of BWA HOT 1
- error of generate_lqseqs_from_cluster HOT 3
- repeat regions HOT 5
- Empty bin directory after installation? HOT 2
- User defined alignment pipeline for short- and long-reads HOT 2
- [question] combine with medaka or not? HOT 3
- run nextplolish2.py sleep HOT 8
- Ignore the secondary alignment HOT 2
- Test run failed at map_genome: "[gzclose] buffer error" HOT 3
- gap filling effects? HOT 2
- Why there is no stats about changes when polished with nextpolish1.py or nextpolish2.py HOT 1
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