Related Issues (20)
- GSEA_GSEA error:: Missing output file(s) `*butterfly_plot.png`? HOT 2
- Duplicated "using" word
- add apeglm log fold change shrinkage HOT 2
- Add log2_assays docu to nextflow_schema after shiny fix HOT 3
- Null device 1 OR error in nsub parameter HOT 4
- Documentation does not fit pipeline behaviour. HOT 3
- Add gprofiler2 functionality HOT 1
- Update subway map
- Output a parameter-resolved R Markdown document, as well as rendered HTML
- Switching to rlog for deseq2 vs method truncates pipeline output HOT 4
- Sample metadata table in the html report is not paginating
- "exclude" samples aren't respected in SHINYNGS_STATICEXPLORATORY - Error in cor(matrices[[g]]) : supply both 'x' and 'y' or a matrix-like 'x' HOT 5
- Proteomics pipeline does not create the required file for the explotarory plot HOT 4
- Simplify pipeline parameters HOT 3
- Multiple variables/interactions HOT 1
- Final report, volcano plot: points wrongly marked red HOT 1
- PLOT_EXPLORATORY module breaks with large number of samples. HOT 1
- Errors thrown out in NFCORE_DIFFERENTIALABUNDANCE:DIFFERENTIALABUNDANCE:DESEQ2_DIFFERENTIAL HOT 3
- pandoc conversion failed in differential abundance test run HOT 2
- incomplete matches of variable name HOT 1
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from differentialabundance.