wrong representation about nglview HOT 5 CLOSED

Please ignore the commands in the notebook (due to copy and paste).

Below is correct one (but still got wrong representation)

import warnings
warnings.filterwarnings('ignore')
import pytraj as pt
import nglview as nv

traj = pt.load('single.pdb')
view = nv.show_pytraj(traj)
view.add_representation('surface')
view

from nglview.

Looks like an error with the index of the surface mesh. I remember fixing some bugs in the dev branch.

from nglview.

Looks ok in the ngl dev branch. I was thinking about updating nglview after the next ngl release

from nglview.

do you have time line for this?

also, can you tell me how to update from ngl to nglview?

just:

- cd ngl/build
- ./make.sh
- cp ../js/build/*.js /to/nglview/nglview/html/static

from nglview.

I asked because I need to visualize 45 proteins * 500-1000 conformations. And the cluster I am using does not allow to use VMD :)).

from nglview.