Comments (1)
ctb
commented on July 23, 2024
Some questions and thoughts:
- is there a local expert on some software or another who can help you with it?
- citation - can you find a paper that has used the software to do what you want to do with it?
- benchmark - is there a benchmark study that shows that the software performs OK against others?
- concordance in results - does the result of using your chosen software/pipeline agree with others?
- software reviewed - has the software itself been published/reviewed? (if so, this is a better sign than if it shows up in an appendix to a Science article about some biology.)
from angus.
Related Issues (20)
- Overall thoughts on current status of materials HOT 3
- comments from review of day 1 and day 2 material
- link to ssh private key in angus/jetstream/login.md is to old dibsi slack, and not accessible
- Workflow diagrams
- navigation shortcut to TOC HOT 1
- for running command line blast, should format so no soft-wrap HOT 2
- md5sum HOT 1
- update CoC HOT 2
- md5sum error HOT 1
- switching between terminal tabs HOT 1
- trial run of new deseq2 material HOT 3
- Add challenge questions to the fastqc/trimmomatic lesson
- add a challenge problem to the salmon output HOT 1
- add conda commands to the table HOT 2
- Add inline comments to snakemake tutorial HOT 1
- Clean branches
- add memory resource in Intro_to_Clusters.md
- Typo(s) in conda lesson HOT 1
- add a license to the repo? HOT 4
- angus 2019 doc pages not rendering correctly HOT 1
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from angus.