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How to reach me: [email protected]

Iā€™m currently working on:

  • Personal portfolio website
  • UI/component libraries
  • Image analysis software
  • MEA analysis
  • CMS software
  • Gene regulatory network and cell types analysis from single-cell RNA-seq data

Nik Merlock's Projects

allensdk icon allensdk

code for reading and processing Allen Institute for Brain Science data

brian2 icon brian2

Brian is a free, open source simulator for spiking neural networks.

cellprofiler icon cellprofiler

An open-source application for biological image analysis

cellprofiler-analyst icon cellprofiler-analyst

Open-source software for exploring and analyzing large, high-dimensional image-derived data.

d3 icon d3

Bring data to life with SVG, Canvas and HTML. :bar_chart::chart_with_upwards_trend::tada:

jsx-lite icon jsx-lite

Write components once, run everywhere. Compiles to Vue, React, Solid, Angular, Svelte, and Liquid. Import code from Figma and Builder.io

loomr icon loomr

An R-based interface for loom files

neurokit icon neurokit

NeuroKit2: The Python Toolbox for Neurophysiological Signal Processing

neurokit.py icon neurokit.py

A Python Toolbox for Statistics and Neurophysiological Signal Processing (EEG, EDA, ECG, EMG...).

neurolib icon neurolib

Easy whole-brain modeling for computational neuroscientists šŸ‘©šŸæā€šŸ”¬šŸ’»šŸ§ 

openrna icon openrna

Open-source toolbox and workflows for automated analysis of RNAscope data from human and mouse

pyscenic icon pyscenic

pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.

sapper-template icon sapper-template

A template that includes Sapper for Svelte, Firebase functions and hosting, TypeScript and TypeGraphQL, Tailwind CSS, ESLint, and automatic building and deployment with GitHub Actions

scenic icon scenic

SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.

scenicprotocol icon scenicprotocol

A scalable SCENIC workflow for single-cell gene regulatory network analysis

sims icon sims

simulations for the Computational Cognitive Neuroscience textbook

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