nirwan1265 Goto Github PK

alphafold

Open source code for AlphaFold.

bzea_introgression_finder

Find your BZea lines for your favourite gene.

bzea_kmergwas

clayton_2023

This repository is for the phenotypes planted in Clayton, NC, but the Alvarez lab.

comp_gwas

Easy combination of SNP pvalues from GWAS data using GBJ package

conda_r_skeleton_helper

Cleaning up Conda r-packages

csc-530-proposal--motif-evolution

diplo_introgression

This repository holds the introgression analysis pipeline and results for diploperennis.

docker-hazel-ncsu

A work space for running a Docker Image

geneticalgorithm-findingmotif

ggblup

genomic prediction for gwas using SNPs and phenotype

gmstool

ggBLUP, random forest, CNN, DNL phenotype prediction

gwas-phenoprediction

GWAS phenotype prediction from SNP's

gwas_tutorial

R for Plant Breeding is open source resource to lear the Plant Breeding and Genetics related data analysis and visualizations

harvester

Combine candidate evidence from multiple sources

hiddenmarkovmodel

Code for the Hidden Markov Model Tutorial Series

hilo_lipid

This github page outlines the prediction algorithm for HiLo lipids.

illumina_pacbio_hybrid

This github page defines the workflow for the joint analysis for Illumina and PacBio sequences

image-segmentation

Image Segmentation using SAM and openCV

introgression_map

mapping

metashape

Workflow for Metashape

metashape-1

Easy, reproducible Metashape photogrammetry workflows

mklmm-pheno.prediction

Multi Kernel Linear Mixed Models for Complex Phenotype Prediction-forked from omerwe/MKLMM

msdial-tutorial

A workflow for MSDIAL

nirwan1265

Config files for my GitHub profile.

parallelizing

R code for parallelizing scripts to run on multiple cores

peerscholars_aug

peerscholars_aug2

phenotype_prediction_pipeline

Regression to infer an 'omic'-phenotype association