Nirwan Tandukar's Projects
Open source code for AlphaFold.
Find your BZea lines for your favourite gene.
This repository is for the phenotypes planted in Clayton, NC, but the Alvarez lab.
Easy combination of SNP pvalues from GWAS data using GBJ package
Cleaning up Conda r-packages
This repository holds the introgression analysis pipeline and results for diploperennis.
A work space for running a Docker Image
genomic prediction for gwas using SNPs and phenotype
ggBLUP, random forest, CNN, DNL phenotype prediction
GWAS phenotype prediction from SNP's
R for Plant Breeding is open source resource to lear the Plant Breeding and Genetics related data analysis and visualizations
Combine candidate evidence from multiple sources
Code for the Hidden Markov Model Tutorial Series
This github page outlines the prediction algorithm for HiLo lipids.
This github page defines the workflow for the joint analysis for Illumina and PacBio sequences
Image Segmentation using SAM and openCV
Workflow for Metashape
Easy, reproducible Metashape photogrammetry workflows
Multi Kernel Linear Mixed Models for Complex Phenotype Prediction-forked from omerwe/MKLMM
A workflow for MSDIAL
Config files for my GitHub profile.
R code for parallelizing scripts to run on multiple cores
Regression to infer an 'omic'-phenotype association