Comments (3)
Hi, did you create a .runx file in which you define a LOGROOT? I would do so, and make the path absolute. Maybe try that.
from runx.
Yep, I tried to do so, and made the path absolute now as well. When running (on v.0.0.11), I'm getting something similar to this:
python -m runx.runx sweep.yml -i
Copying codebase to /home/.../onordesjo/git/runxtest/sweep/economic-lyrebird_2021.07.13_13.17 ...
Traceback (most recent call last):
File "/home/.../onordesjo/miniconda3/envs/sequences/lib/python3.8/runpy.py", line 192, in _run_module_as_main
return _run_code(code, main_globals, None,
File "/home/.../onordesjo/miniconda3/envs/sequences/lib/python3.8/runpy.py", line 85, in _run_code
exec(code, run_globals)
File "/home/.../onordesjo/miniconda3/envs/sequences/lib/python3.8/site-packages/runx/runx.py", line 402, in <module>
main()
File "/home/.../onordesjo/miniconda3/envs/sequences/lib/python3.8/site-packages/runx/runx.py", line 395, in main
run_experiment(args.exp_yml)
File "/home/.../onordesjo/miniconda3/envs/sequences/lib/python3.8/site-packages/runx/runx.py", line 390, in run_experiment
run_yaml(experiment, runroot)
File "/home/.../onordesjo/miniconda3/envs/sequences/lib/python3.8/site-packages/runx/runx.py", line 345, in run_yaml
copy_code(logdir, runroot, code_ignore_patterns)
File "/home/.../onordesjo/miniconda3/envs/sequences/lib/python3.8/site-packages/runx/runx.py", line 216, in copy_code
copytree(runroot, tgt_code_dir, ignore=code_ignore_patterns)
File "/home/.../onordesjo/miniconda3/envs/sequences/lib/python3.8/shutil.py", line 547, in copytree
return _copytree(entries=entries, src=src, dst=dst, symlinks=symlinks,
File "/home/.../onordesjo/miniconda3/envs/sequences/lib/python3.8/shutil.py", line 504, in _copytree
raise Error(errors)
shutil.Error: [('/home/.../onordesjo/git/runxtest/sweep/economic-lyrebird_2021.07.13_13.17/code/sweep/economic-lyrebird_2021.07.13_13.17/code/sweep/economic-lyrebird_2021.07.13_13.17/code/sweep/economic-lyrebird_2021.07.13_13.17/code/sweep/economic-lyrebird_2021.07.13_13.17/code/sweep/economic-lyrebird_2021.07.13_13.17/code/sweep/economic-lyrebird_2021.07.13_13.17/code/sweep/economic-lyrebird_2021.07.13_13.17/code/sweep/economic-lyrebird_2021.07.13_13.17/code/sweep/economic-lyrebird_2021.07.13_13.17/code/sweep/economic-lyrebird_2021.07.13_13.17...
...
economic-lyrebird_2021.07.13_13.17/code/sweep'")]
from runx.
It's not clear to me why there's ...
in your LOGROOT path. Maybe you could show your .runx file?
from runx.
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from runx.