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asthma_prediction

a deep learning-based predictive model used to predict the risk of asthma exacerbation among asthma patients according to a history of EHR data

awsome-domain-adaptation

A collection of AWESOME things about domian adaptation

bert-as-service

Mapping a variable-length sentence to a fixed-length vector using BERT model

biobert-pretrained

BioBERT: a pre-trained biomedical language representation model for biomedical text mining

biopw

BioPW is an interactive visualization tool for biological pathway Linked Data.

capsnet-keras

A Keras implementation of CapsNet in Hinton's paper Dynamic Routing Between Capsules

capsule_networks

This is the code for "Capsule Networks: An Improvement to Convolutional Networks" by Siraj Raval on Youtube

clamp

some functions for using and reading the CLAMP tool

clinicalbert

repository for Publicly Available Clinical BERT Embeddings

cnn-lstm-crf-for-cqa-answer-tagging

Provide the results for CNN+LSTM+CRF for cQA answer tagging

cnn_sentence

CNNs for sentence classification

da

dateparser

python parser for human readable dates

deep-matching

language matching models using tensorflow

dense_bilstm

Tensorflow Implementation of Densely Connected Bidirectional LSTM with Applications to Sentence Classification

documentfeatureselection

A set of metrics for feature selection from text data

dynamic-tensorflow-tutorial

Tensorflow tutorial of building different dynamic recurrent neural network

gat

Graph Attention Networks (https://arxiv.org/abs/1710.10903)

gaussian-lda-word2vec

LDA topic modeling with word2vec using gaussian topic distributions for infinite vocabulary

gaussian_lda

gcn-hiv

code for JAMIA paper "Network context matters: graph convolutional network model over social networks improves the detection of unknown HIV infections among young men who have sex with men"

gramme

GrAMME: Semi-Supervised Learning using Multi-layered Graph Attention Models

grobid

A machine learning software for extracting information from scholarly documents

heideltime

A multilingual, cross-domain temporal tagger developed at the Database Systems Research Group at Heidelberg University.

heideltime_plus

add the libs and sources to the basic heideltime package so that it can deal with the English data

image-captioning-for-chest-x-ray

knowledge-graph-embeddings

Implementations of Embedding-based methods for Knowledge Base Completion tasks

llama-adapter

Fine-tuning LLaMA to follow instructions within 1 Hour and 1.2M Parameters

lmflow

An Extensible Toolkit for Finetuning and Inference of Large Foundation Models

med2vec

Repository for Med2Vec project