omniaalwazzan Goto Github PK

attention-

basic-evaluation-measures

Basic evaluation measures from the confusion matrix

brain_tumor_clustring

customdataloader-for-images-tabular-data-

dataloaders_in_pytorch_for_different_data_augmentations

derm7pt

Dermatology dataset composed of a diagnosis and seven-point checklist criteria labels

dicom_medical_image

Reading and viewing dicom image with python as volumes (3D)

dna_mathylation

docekris-python-applications

Python application examples in Docker containers

einops

Deep learning operations reinvented (for pytorch, tensorflow, jax and others)

foaa

FOAA: Flattened Outer Arithmetic Attention For Multimodal Tumor Classification, ISBI - 2024

grad-cam_vgg19

Plot Grad-Cam heatmap from VGG19 output

image-augmentation

Image augmentation for object detection, segmentation and classification

image-captioning

Image Captioning using InceptionV3 and beam search

image_captioning_keras

Image captioning from scratch keras

moab

Fusion models implemented in our ISBI23 paper (Oral) ``MOAB: Multi-Modal Outer Arithmetic Block for Fusion of Histopathological Images and Genetic Data for Brain Tumor Grading``. Omnia Alwazzan, Abbas Khan, Ioannis Patras, Gregory Slabaugh, ISBI 2023

multimodal-medical

mustang

Multi-stain graph self attention multiple instance learning for histopathology Whole Slide Images - BMVC 2023

omniaalwazzan.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

pipeline-processing-tcga-slides-for-mil

This repo provides an exhaustive pipeline of processing TCGA whole-slide images for downstream multiple instance learning.

pytorch-clssification-models

Models for multi-class classification implimented in pytorch

reading-writing-csv-files

Using pandas dataframe to proccess csv files

scn_medimg_openslide

self-supervised-embedding-fusion-transformer

The code for our IEEE ACCESS (2020) paper Multimodal Emotion Recognition with Transformer-Based Self Supervised Feature Fusion.

torch-tensor-operation

vit

A Pytorch implementation of ViT - VisionTransformer