Comments (8)
from edta.
Dear Fuyou,
Please let me know if this issue is resolved or still persistent. Also please update your EDTA package as I just posted an official release with more exciting updates. Let me know if you have more questions.
Happy New Year!
Best,
Shujun
from edta.
Dear Shujun,
I am much appreciated for your excellent work. The job is running well with your suggestion. But I am not sure the results is correct since my genome is fungal, not rice.
Thanks,
Fuyou
from edta.
from edta.
from edta.
Dear @sunnycqcn,
Thank you for your update. If possible, please share your experience or even some of your EDTA results in the "Happy Users" page. It will help others to get confidence and learn to use this method. Thank you for using EDTA! Happy New Year!
Best,
Shujun
from edta.
I will do after I finish my all isolate. I have more 160 isolates.
Thanks,
Fuyou
from edta.
That's exciting! Look forward to your update.
Best,
Shujun
from edta.
Related Issues (20)
- make_masked.pl Permission denied HOT 1
- ERROR: Intact TE annotation not found in Aros.genome.fa.mod.EDTA.intact.gff3 at EDTA.pl line 638. HOT 1
- The inconsistency between the classification labels of the EDTA library and RepeatMasker HOT 1
- Combining RM rows HOT 5
- fa file HOT 1
- ERROR: TE annotation stats results not found in mod.EDTA.TE.fa.stat! HOT 3
- dependencies not found in singularity install HOT 4
- Would you consider adding -w $genome_file_real_path.EDTA.raw/TIR to line 576 of EDTA_raw.pl HOT 1
- Can't locate SearchResult.pm in @INC (you may need to install the SearchResult module) HOT 3
- Hey!Have you solved your problem? I had the same problem. HOT 1
- I just found that this script in the (../../share/RepeatMasker/) folder will not have this error, maybe can copy the input file, I think it can try?If you tried, can you tell me the result? HOT 3
- TIR not found? HOT 1
- 文件缺失 HOT 1
- Stuck by BLAST in LTR finding HOT 2
- PanEDTA test output
- [No LINE, EDTA 2.2.0] Empty LINE file after RM2
- LINE and SINE results files has 0 bp!
- ERROR: TE annotation stats results not found in B.purpurea.fasta.mod.EDTA.TE.fa.stat! HOT 1
- '调用失败' HOT 8
- Statistical genome size
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from edta.