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Hi there,

I am Pavlo Hrab - geneticist/bioengineer by training and bioinformatician by passion.

About me

  • šŸ”­ Iā€™m currently working on transformation of ideas on BGC discovery into functionable code. Stay tuned (:
  • šŸŒ± Iā€™m currently learning Biological Data Analysis. Mostly R and Python.
  • šŸ‘Æ Iā€™m looking to collaborate on any bioinformatics-related project.
  • šŸ“« Feel free to reach by any of the social networks, listed above. Or via mail at: [email protected]
  • āš” Fun fact: As stated in this spreadsheet birds usually do not fart, but they can if they want to.

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Pavlo Hrab's Projects

benthos icon benthos

A stream processor for mundane tasks written in Go

bgcviz icon bgcviz

BGCViz - a shiny web app, which uses genomic coordinates of BGCs from different sources for a comprehensive comparison.

docsify icon docsify

šŸƒ A magical documentation site generator.

hrmr icon hrmr

hrmR is a shiny app for HRM analysis, using RFU data. The app is tested for Cfx96 data, but any data should suffice, as long as the format is the same. Besides different plots, the app has also comprehensive clustering options.

metawrap icon metawrap

MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis

obsidian-zotero icon obsidian-zotero

Obsidian.md integrates with Zotero, create literature notes and insert citations from a Zotero library.

process_fasta icon process_fasta

A small collection of one-liners in a one bash script for fasta files processing.

remnote-bot icon remnote-bot

Small telegram bot to send notes into RemNote daily document.

rrnadif icon rrnadif

rRNADif is a method to measure intragenomic 16S rRNA variability within the desired genome sequence against a chosen set of organisms. The app is calculating ML phylogenetic tree and uses mean/median branch length within a set of 16S rRNA as a measure of variability between them

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