pgonzale60 Goto Github PK
Name: Pablo Gonzalez
Type: User
Name: Pablo Gonzalez
Type: User
Extract and count regions from BAM files as specified in BED, outputting as JSON and FASTA
Bioinformatics code libraries and scripts
Nextflow pipeline for turning a set of BUSCO results into a species tree
A place to put Dockerfile for my Docker repositories
Reproducible genome size estimation from hifi reads
A repository containing pipelines for nematode genome assembly, decontamination, scaffolding, and QC
Contains scripts used to annotate the genome assembly and compare alternative annotation approaches
Testing parallelization with nextflow
draft Oscheius assemblies
Scripts and files associated with the chromosomal assembly of O. tipulae manuscript
Personal website
Filter SAM file for soft and hard clipped alignments
Paint tandem repeats in chromosome level assemblies
Identify and find telomeres, or telomeric repeats in a genome.
Get reads with telomeric repeat, trim the repeat and orient the trimmed end as the new beginning
Testing CI
Explore differences between Kallisto, HISAT2-featurecounts, HISAT2-stringtie. The results are benchmarked by assessing the sylamer enrichment signal. The datasets used involve miRNA abundance alterations.
Visualize ancestral linkage groups by BUSCO in genome sequences (chromosomes)
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.