Related Issues (20)
- options to use bfile instead of impute2 for SKAT? HOT 1
- genipe-tutorial fails when broken link HOT 2
- Unknown format code 'd' for object of type 'float' HOT 3
- Error in file genipe/pipeline/cli.py HOT 2
- Module statsmodels, [... WARNING] interaction term is categorical HOT 1
- Error with module lifelines, name 'dmatrices' is not defined HOT 3
- Deprecation warning for barh
- Existing directory 1000GP_Phase3 is not detected HOT 1
- Define an option for the directory with the IMPUTE2 reference files HOT 1
- Error when using a high number of threads for shapeit HOT 19
- Some flaws of the documentation
- ERROR: Reference and Main panels are not well aligned HOT 1
- ERROR missing optional module: pyplink
- Errors when testing newly installed genipe: TypeError: __init__() got an unexpected keyword argument 'normalize' HOT 5
- chrX pipeline HOT 4
- Unreleased version of BioPython (1.73) required HOT 2
- Error when --shapeit-extra '--force' HOT 2
- genotype rate is lower than before imputation
- Support for Impute5 and Shapeit4 HOT 1
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