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phockett avatar phockett commented on August 21, 2024

Some basics in places as of 47b3541

  • Pickle for all self.data
  • Wrapped Pandas (>HDF5) and Xarray (>netCDF) routines tested for aggregate 'fits' data.
  • Basic Xarray > dict > JSON also test, but not yet wrapped to a function.

See also phockett/ePSproc#8 (comment)

Dev notes: code-share/jupyter-shared/PEMtk_dev_2022/io_dev/pemtk_dataIO_tests-dev_200522_StimpyDocker.ipynb

TODO:

  • Finish testing & docs.
  • Generalise methods, currently mainly tested with aggregate fit data. Should be OK for other data types too.
  • Finish identifying issues - currently problems with nested Xarrays and tuple coord data (Euler dim) for HDF5 or JSON serialization. May be able to avoid and/or convert such cases?
  • Custom routine with h5py? Might be best way to handle some tricky cases.
  • Fix ep.readXarray restacking, should include dim checking routines to avoid failure.

from pemtk.

phockett avatar phockett commented on August 21, 2024

Some of the above now fixed by ePSproc updates (see phockett/ePSproc#8 (comment)), see also docs: https://epsproc.readthedocs.io/en/dev/dataStructures/ePSproc_dataStructures_IO_demo_280622.html

Needs testing with and/or porting to PEMtk.

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