planteome Goto Github PK
Name: The Planteome Project
Type: Organization
Bio: Home for the Common Reference Ontologies for Plants
Location: Corvallis, OR, USA
Name: The Planteome Project
Type: Organization
Bio: Home for the Common Reference Ontologies for Plants
Location: Corvallis, OR, USA
This repo is the Planteome fork of geneontology.org AmiGO2 project. Issues in this repo should be reported only on AmiGO issues. Issues can be pushed upstream if relevant for GO.
Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
API for linked biological knowledge
Examples of ontologies that can be extracted from the mappings of the COs and TO
Rice trait ontology
Wheat trait ontology
Maize trait ontology
Barley trait ontology
Sorghum trait ontology
Banana Trait Ontology maintained by Crop Ontology and Musabase
Coconut Trait Ontology
Pearl millet trait ontology
Potato trait ontology
Sweetpotato Trait Ontology maintained by Crop Ontology and SweetpotatoBase
Cassava Trait Ontology maintained by Crop Ontology and Cassavabase
Common bean ontology
Crop Ontology soybean traits
Groundnut trait ontology
Crop Ontology chickpea traits
Lentil trait ontology
Cowpea trait ontology
Pigeon pea ontology
Yam trait ontology
Brachiaria trait ontology
Mungbean trait ontology
Castorbean trait ontology
Oat trait dictionary developed by Crop Ontology, Oat Global, T3 and PepsiCO
Cotton trait ontology
This is a place to keep the files which are used for the various reference ontologies.
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