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Jordi's Projects

easybuild-easyconfigs icon easybuild-easyconfigs

A collection of easyconfig files that describe which software to build using which build options with EasyBuild.

easybuild-framework icon easybuild-framework

EasyBuild is a software installation framework in Python that allows you to install software in a structured and robust way.

fgbio icon fgbio

Tools for working with genomic and high throughput sequencing data.

htslib icon htslib

C library for high-throughput sequencing data formats

miller icon miller

Miller is like awk, sed, cut, join, and sort for name-indexed data such as CSV, TSV, and tabular JSON

mons-fractals icon mons-fractals

Practica lliure d'enginyeria informàtica previ any 2000 fet en Java on es generen mons virtuals 3D en VRML (.wrl)

mpistat icon mpistat

Toolchain for collecting and reporting on inode metadata for HPC filesystems,

picard icon picard

A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

pysam icon pysam

Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.

sampleproject icon sampleproject

A sample project that exists for PyPUG's "Tutorial on Packaging and Distributing Projects"

slurm icon slurm

SLURM: A Highly Scalable Resource Manager

umi-tools icon umi-tools

Tools for handling Unique Molecular Identifiers in NGS data sets

wttr.in icon wttr.in

:partly_sunny: The right way to check the weather

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