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qiyueming's Projects

adna-workflow icon adna-workflow

Workflow for processing Illumina sequencing runs for ancient human DNA

bioeditmultisequencealignment icon bioeditmultisequencealignment

Resurrecting multiple sequence alignment method used to analyze long read RNAsequencing data from PacBIo on Healthy Human Bone Marrow -- it begins with calling the open reading frames to translate the DNA to Protein sequence and ends with at time manual editing to align the sample specific sequence data.

deep-learning-books icon deep-learning-books

Books for machine learning, deep learning, math, NLP, CV, RL, etc. 一些机器学习、深度学习等相关话题的书籍。

dna-consensus-sequence icon dna-consensus-sequence

A small DNA Consensus Sequence Generator made as a project, emphasizing the use of data structures in programming for the Intro to Programming 1 at UPRM

glapd icon glapd

design common and specific primer for LAMP using the whole genome

handson-ml icon handson-ml

A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in python using Scikit-Learn and TensorFlow.

lamp-virus icon lamp-virus

Pipeline to develop one-step real-time RT-LAMP assays for specific detection of virus

lava-dna icon lava-dna

LAVA (LAMP Assay Versatile Analysis) is an extendable open-source Loop-mediated isothermal AMPlification (LAMP)

memo icon memo

学习笔记:我的第一个github仓库

ngs-primerplex icon ngs-primerplex

NGS-PrimerPlex is a high-throughput tool for mupltiplex primer design

primerserver2 icon primerserver2

PrimerServer2: a high-throughput primer design and specificity-checking platform

pyrosetta.notebooks icon pyrosetta.notebooks

Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design

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