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doc-annovar

Documentation for the ANNOVAR software

fairseq

Facebook AI Research Sequence-to-Sequence Toolkit written in Python.

genotyping-comparison

Bechmark of population-scale genotypers

giab_data_indexes

This repository contains data indexes from NIST's Genome in a Bottle project.

hgsv_sv_integration_pipe

nanodecoder

NanoDecoder: attention-based seq2seq basecaller for nanopore reads

opennmt-py

Open Source Neural Machine Translation in PyTorch

psychtoolbox-3.github.com

Source files for the website

qiaseq-dna

example code for processing reads from QIAGEN QIAseq DNA enrichment kits

r-imaging-genetics

rb-sv

Pipeline of structural-variation calling for Retinoblastoma samples

smcounter

smCounter: a versatile UMI-aware variant caller to detect both somatic and germline SNVs and indels. Published in article "Detecting very low allele fraction variants using targeted DNA sequencing and a novel molecular barcode-aware variant caller", BMC Genomics, 2017 18:5. https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-016-3425-4

sv-ont-tibetan

Characterization of Structural Variation in Chinese samples

vcf2maf

Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms

weui-wxss

A UI library by WeChat official design team, includes the most useful widgets/modules.