Comments (4)
These two should be included in the requirements.txt
file at the moment (bx-python==0.9.0
and pyfaidx==0.7.2.1
) -- I'm able to run the full pipeline with a fresh install of the requirements on my end. Could you share a more detailed error message?
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Hmm, strange. Maybe I wasn't paying close enough attention to the terminal messages when I was installing the requirements.txt
file. I've since noticed this behaviour with a few other packages in this file (eg. numba
), so I'll assume it's a problem on my end and close the issue.
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statsmodels
might genuinely be missing
from proj-mutator-mapping.
Ahh, I believe statsmodels
should be installed as a dependency of statannotations
-- but probably a good idea to include that as its own requirement. To be safe, I think I might just update the requirements.txt
to be a pip freeze
of the complete env needed to reproduce figs/analysis.
from proj-mutator-mapping.
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