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assemblage

Tools for working with second gen assemblies, fasta sequences, etc

biocode

Bioinformatics code libraries and scripts

duplex-sequencing

A local fork to keep the scripts that are used for Ryan Hilli's project

easybuild-easyblocks

Collection of easyblocks that implement support for building and installing software with EasyBuild.

evalex

EvalEx is a handy expression evaluator for Java, that allows to evaluate simple mathematical and boolean expressions.

falcon-integrate

Build and integration- testing for FALCON

flux-tutorials

Tutorial slides and materials

galaxy

Data intensive science for everyone.

gatk

GATK Official Release Repository

grafana-dashboards

Grafana dashboards for MySQL and MongoDB monitoring using Prometheus

grafana-helm-charts

hpcgridrunner

source code for HpcGridRunner

lustre_exporter

Prometheus exporter for use with the Lustre parallel filesystem

lustre_manual_markdown

Lustre Manual in the Format of Markdown

mod_auth_openidc

OpenID Certified™ OpenID Connect Relying Party implementation for Apache HTTP Server 2.x

msprojects

Repo. to hold my Mega Squirt Project files

netbox

IP address management (IPAM) and data center infrastructure management (DCIM) tool.

prometheus-rpm

Prometheus RPM Packages

pypeflow

a simple lightweight workflow engine for data analysis scripting

recurly-java-library

Java library for Recurly

scripts

Blaxter lab scripts

sequenceserver

Intuitive local web frontend for sequence BLAST (www search form)

singularity

My collection of singularity containers recipes

stmf-ha

COMSTAR High-Availability tools for Illumos distros

test

trinityrnaseq

Trinity RNA-Seq de novo transcriptome assembly