Comments (1)
Hi,
Have you solved the problem? There's clearly something off with the way that the annotations are parsed into EDFBrowser, because each discrete epoch should be 30-seconds. Based on your screenshot, it seems that the epochs are interpreted by EDFBrowser to have roughly ~1-sec duration, which is clearly wrong.
To generate a confusion matrix you need to:
- Get the YASA predicted sleep stages
- Load the reference sleep stages into a numpy array or a pandas series, with the same label mapping as YASA (e.g. 0 = Wake, 1 = N1, etc)
- Use scikit-learn to calculate and/or plot the confusion matrix.
Thanks
Raphael
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