2024-04-23-rice-health-in-nepal-online

adv-r

Advanced R programming: a book

ann-benchmarks

Benchmarks of approximate nearest neighbor libraries in Python

anvio

An analysis and visualization platform for 'omics data

ars-rqc

A rolling quality control workflow for the USDA ARS GBRU

awesome-bioinformatics

A curated list of awesome Bioinformatics libraries and software.

awesome-deepbio

A curated list of awesome deep learning applications in the field of computational biology

awesome-network-analysis

A curated list of awesome network analysis resources.

awesome-pipeline

A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin

awesome-r

A curated list of awesome R packages, frameworks and software.

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

aws-genomics-workflows

Genomics Workflows on AWS

azimuth

Fork of Azimuth (Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency), updated to work with Python 3.6+

bandage

a Bioinformatics Application for Navigating De novo Assembly Graphs Easily

bbmap

(Not Offical) BBMap short read aligner, and other bioinformatic tools.

biobakery_workflows

bioBakery workflows is a collection of workflows and tasks for executing common microbial community analyses using standardized, validated tools and parameters.

biocode

Bioinformatics code libraries and scripts

bioconda-recipes

Conda recipes for the bioconda channel.

bioconvert

Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.

bioinformatics

:microscope: Path to a free self-taught education in Bioinformatics!

bioinformatics-software

Bioinformatics software list

bioinformatics_learning

Bioinformatics learning (for high performance computing, big data, and machine learning)

biotools

A list of useful bioinformatics resources

blackcater

Using Node.js to generate my Github profile readme automatically.

blast_tools

Simple Scripts to Assist in Processing of BLAST data

cheatsheets-ai

Essential Cheat Sheets for deep learning and machine learning researchers https://medium.com/@kailashahirwar/essential-cheat-sheets-for-machine-learning-and-deep-learning-researchers-efb6a8ebd2e5

checkm

Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes

codaseq

Functions for compositional analysis of high throughput sequencing

compositions

Site that contains musings and code for compositional analysis of high throughput sequencing experiments

concoct

Clustering cONtigs with COverage and ComposiTion