Comments (4)
Thanks, this was an oversight on my part :) I updated the rsync function such that it should now work with both notations.
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Thanks @mmehan for your comments! I'm not sure what the underlying solution was, but I modified qsub_run.R
based on your suggestions.
Are you able to run the example code in the readme now?
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Yeah it's working now - thanks! I had to make another minor modification to get the rsync from the remote to work. I think the rsync command failed because I defined my remote server in the config with the ssh port at the end like the README example. This led to two colons in the remote destination argument for rsync. When I removed the port from the remote_src in rsync_remote it transferred successfully. This didn't come up before because the master branch is using scp.
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qsub 1.1.0 includes the fixes for this issue and is on its way to CRAN. Thanks for the feedback!
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Related Issues (6)
- Handle error messages correctly HOT 1
- Remove the temporary directories even if an error was thrown HOT 1
- Add a progress bar while waiting for the output to finish HOT 3
- Offer an alternative method, instead of a qsublapply function, split it up into qsubsubmit and qsubretrieve. HOT 1
- Error in rsync_remote yields no output HOT 10
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