reactome Goto Github PK
Name: Reactome
Type: Organization
Bio: A curated pathway database
Location: Canada, US, UK
Blog: https://reactome.org
Reactome's Projects
add-links
This is the AddLinks component of the Release system
add-links-checker
Checks add links reference database referrer count between release databases
analysis-core
Pathway enrichment and expression analysis as well as species comparison tool
analysis-report
analysis-service
A RESTful API to access pathway analysis tools
apicuron-exporter
bcc-2020
Repository containing supplemental files and information for the 'How to use Reactome data, tools and web service' presentation at BCC 2020.
biomodels-mapper
Mapping BioModels to Reactome using analysis results
browser-curator
A tool for visualising and interacting with pathways data
connectivity-analyzer
container
:construction: Repository for files for running a Reactome production-like environment inside a docker container. Currently, this project's status is "Work-In-Progress". :construction:
content-service
The new Reactome REST API to access the data
curation-query
Projects for custom queries to the Reactome curation database
curator-service
curator-website
curatortool
The Reactome Java API for the relational database and the Curator Tool
data-content
data-export
Creates the files to be placed in the download section
data-release-pipeline
The next generation of the Reactome data release pipeline.
descartes_rpa
disease-digester
To represent the disease-gene binary relationship with a REACTOME overlay
doi-suggester
Suggests which entities might need a DOI
elk-setup
Setup to use when processing logs with ElasticSearch, Logstash, & Kibana
elk-setup-v2
event-pdf
Generates the Reactome book
experiment-digester
fi_network_build
This project is used to build the Reactome functional interaction network.
graph-archetype
A maven archetype for graph-core based projects
graph-core
Models the Reactome knowledgebase into a interconnected graph
graph-core-curator
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