VDJ data loading about icellr HOT 3 CLOSED

Would you run the example file to check. I just added an example file to the tutorial. I will soon add a full example with tutorials and more explanations. If you still get an error give me some time and I will fix it. I have been a bit busy but soon will debug more VDJ parts of the tool.

from icellr.

Sorry for late reply.
In tutorial, I just found the example file with gene expression data.
Where is VDJ data in tutorial?

from icellr.

First update iCellR to version 1.5.8. It's not in CRAN yet so update from GitHub.

Then add your VDJ data to iCellR object
my.obj <- add.vdj(my.obj, vdj.data = my.vdj.data)

The rest is explained in detail in the updated section for plotting "How to plot clonotypes".

from icellr.