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3dinfomax

Making self-supervised learning work on molecules by using their 3D geometry to pre-train GNNs. Implemented in DGL and Pytorch Geometric.

afmformats

Python library for reading common AFM file formats

angular-translate

Translating your AngularJS 1.x apps

autoballs

Python package for segmentation of axons and morphological analysis.

basenji

Sequential regulatory activity predictions with deep convolutional neural networks.

centroid-rna-package

Centroid RNA package

clearml

ClearML - Auto-Magical Suite of tools to streamline your ML workflow. Experiment Manager, ML-Ops and Data-Management

crispron

CRISPR Cas9 ontarget prediction software

detectron2

Detectron2 is FAIR's next-generation platform for object detection, segmentation and other visual recognition tasks.

graphein

Protein Graph Library

graphormer

Graphormer is a deep learning package that allows researchers and developers to train custom models for molecule modeling tasks. It aims to accelerate the research and application in AI for molecule science, such as material discovery, drug discovery, etc.

hpbandster

a distributed Hyperband implementation on Steroids

magpy

Elemental feature lookup for materials infomatics

personal

pytorch

Tensors and Dynamic neural networks in Python with strong GPU acceleration

pytorch_geometric

Graph Neural Network Library for PyTorch

pytraction

Bayesian Traction Force Microscopy

rabbitmq-server

Open source RabbitMQ: core server and tier 1 (built-in) plugins

rg314

segmentation_models.pytorch

Segmentation models with pretrained backbones. PyTorch.

systemd-ngrok

Automatically start ngrok by systemd

templates

Document templates for open-source projects (README, CONTRIBUTING, GitHub templates)