Name: Robert Clark
Type: User
Company: University of Pittsburgh
Bio: My background is in the area of Mathematical Optimization and Numerical Analysis. I hold a PhD in Computer Sciences from the University of Wisconsin-Madison.
Location: I don't check my gmail account very often.
Robert Clark's Projects
RNM to RBM translation project.
Rule-based modeling framework
A simple textual todo manager for Eclipse.
Tutorial
A general-purpose, stochastic, biochemical reaction simulator for large reaction networks
This contains the HTML file that I used in my "Hitchhiker's Guide to the RuleBender Network" talk.
This builds the run_network executable, which is the ODE solver invoked by BioNeGen.
Julia interface to Sundials, including a nonlinear solver (KINSOL), ODE's (CVODE), and DAE's (IDA).
Utilities for testing OSX on travis-ci.org
This tests the automatic deployment of files generated during a Travis build.
An example that will cause a build failure