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followers: 6.0 following: 35.0 repos: 14.0 gists: 0.0

Name: Riccardo Massei

Type: User

Company: UFZ

Bio: In two weeks, I can automate a task that takes you 30 minutes to complete manually.

Location: Leipzig, Germany

Hej you! Hi there 👋

My name is Riccardo, I am from Italy, living in Leipzig since 2012 and currently working in UFZ. I am actively working in the field of data management and FAIR data.

In the last years, I worked with the analysis of image objects using python. I am also occasionally working on the analysis and visualization of behavioural datasets collected from danio rerio larvae and gammarus pulex using automatic tracking systems.

I have long term experience in building user-friendly workflows to increase reproducibily in life science and allows people with no experience in coding to run their own ideas or analysis workflows. I am also a freelancer teacher of KNIME and OMERO in my working instution.

Riccardo Massei's Projects

2024-jn-omero-pipeline

Material and Instruction for the course "Bioimage data management and analysis with OMERO"

2024_flowcitometry_multichannel

An integrative workflow to extract single images from flow citometry files and create multichannel ome.tiff images

danio-python-tools

A collections of tools for the analysis of zebrafish embryos behavioural data

galaxy-image-analysis

Galaxy tools for image analysis

ifc

Tools for Imaging Flow Cytometry

image-processing

Image Processing with Python

mb-galaxy-tools

omero-scripts

Core OMERO Scripts

py50

Generate Dose-Response Curves in Python

rmassei

Config files for my GitHub profile.

training

training-material

A collection of Galaxy-related training material

ufz-galaxy-tools

Tools installed at the UFZ Galaxy server

usegalaxy-eu-tools

List of tools included in https://usegalaxy.eu

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