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Ya-Zhou Shi's Projects

abc2a icon abc2a

ABC2A: A simple and fast method for accurate backmapping of RNA coarse-grained models to all-atom structures

awesome-pytorch-list icon awesome-pytorch-list

A comprehensive list of pytorch related content on github,such as different models,implementations,helper libraries,tutorials etc.

coconet icon coconet

RNA Contact Prediction Using Coevolution and Convolutional Neural Network

coda icon coda

This is the method CODA(covariation-induced deviation of activity) introduced in the paper "Accurate inference of the full base-pairing structure of RNA by deep mutational scanning and covariation-induced deviation of activity".

dnafold icon dnafold

A coarse-grained model for DNA 3D structure folding

introdase icon introdase

《数据科学与工程导论》教材配套资源

ml-nlp icon ml-nlp

此项目是机器学习(Machine Learning)、深度学习(Deep Learning)、NLP面试中常考到的知识点和代码实现,也是作为一个算法工程师必会的理论基础知识。

rna-briq icon rna-briq

Robust RNA structure refinement by a nucleobase-centric sampling algorithm coupled with a backbone rotameric and quantum-mechanical-energy-scaled base-base knowledge-based potential

rna-mobiseq icon rna-mobiseq

Deep mutational scanning and mobility-based selection for RNA structure inference

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